BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012D10SP1|AL426364
(821 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1604 0.0
>3x_Contig1800
Length = 38778
Score = 1604 bits (805), Expect = 0.0
Identities = 814/821 (99%)
Strand = Plus / Minus
Query: 1 atcgtcatttacagagttggccgaatcgaaagacccgtctgcattgtacttcaagctggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32550 atcgtcatttacagagttggccgaatcgaaagacccgtctgcattgtacttcaagctggt 32491
Query: 61 agagccatctttcttggtgtgtagaagttcaaaaagagcagttaaaccggctgccccagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32490 agagccatctttcttggtgtgtagaagttcaaaaagagcagttaaaccggctgccccagc 32431
Query: 121 accgataattgcgacagattgttgtttcttcttctcttgtgtcatattgttgtgagtata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32430 accgataattgcgacagattgttgtttcttcttctcttgtgtcatattgttgtgagtata 32371
Query: 181 agttttcctgacggagtgacttatgcacttctttgggatatatcattaatcaattgaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32370 agttttcctgacggagtgacttatgcacttctttgggatatatcattaatcaattgaata 32311
Query: 241 atattacttatcaattggttcccacatctagagttaatcacctcatacatttatataact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32310 atattacttatcaattggttcccacatctagagttaatcacctcatacatttatataact 32251
Query: 301 attgakccacttaagtkgaaagccatcccatgccacacttcatagatgtccttcttaagc 360
||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32250 attgatccacttaagttgaaagccatcccatgccacacttcatagatgtccttcttaagc 32191
Query: 361 caatgctcgcttcaattgtratgttcacactttaaacttagcctttaccttaagtctcct 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 32190 caatgctcgcttcaattgtaatgttcacactttaaacttagcctttaccttaagtctcct 32131
Query: 421 atggcttgaraaagtcaatgtctttcaatgtctcttcaaaatggtaatagagtgtgtttc 480
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32130 atggcttgaaaaagtcaatgtctttcaatgtctcttcaaaatggtaatagagtgtgtttc 32071
Query: 481 taaacacgcatctcacgatttccgaagagcatcgctgcactaagttgcttcgccggagtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32070 taaacacgcatctcacgatttccgaagagcatcgctgcactaagttgcttcgccggagtc 32011
Query: 541 caaccactcgaggaactgaraaaktgtggacaccctgattactcagtgaaaatactacaa 600
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 32010 caaccactcgaggaactgaaaaattgtggacaccctgattactcagtgaaaatactacaa 31951
Query: 601 agtcttcgaagaagctgaaaaggtggggcaggccaagaatatgtgatttatggtcatgtg 660
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 31950 agtcttcgaagaagctgaaaaggtggggcaggccaagaatatgtaatttatggtcatgtg 31891
Query: 661 atcctatcaagctggaaatgataagtaaggtacattgcgtaaatatgcatcacaacgata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31890 atcctatcaagctggaaatgataagtaaggtacattgcgtaaatatgcatcacaacgata 31831
Query: 721 ggaacgagaggggcagagtgtaaacgcagccagtgacctccattggacgttttgctcttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31830 ggaacgagaggggcagagtgtaaacgcagccagtgacctccattggacgttttgctcttt 31771
Query: 781 tattaattctgtttgttaattgaatggctatcgcagccatg 821
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 31770 tattaattctgtttgttaattgaatggctatcgcagccatg 31730
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5231
Number of Sequences: 1807
Number of extensions: 5231
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 821
length of database: 10,358,551
effective HSP length: 16
effective length of query: 805
effective length of database: 10,329,639
effective search space: 8315359395
effective search space used: 8315359395
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)